HARRICK PLASMA

Scalable microfluidics for single-cell RNA printing and sequencing

Many important biological questions demand single-cell transcriptomics on a large scale. Hence, new tools are urgently needed for efficient, inexpensive manipulation of RNA from individual cells. We report a simple platform for trapping single-cell lysates in sealed, picoliter microwells capable of printing RNA on glass or capturing RNA on beads. We then develop a scalable technology for genome-wide, single-cell RNA-Seq. Our device generates pooled libraries from hundreds of individual cells with consumable costs of $0.10-$0.20 per cell and includes five lanes for simultaneous experiments. We anticipate that this system will serve as a general platform for single-cell imaging and sequencing.

Bose, Sayantan, Zhenmao Wan, Ambrose Carr, Abbas H. Rizvi, Gregory Vieira, Dana Pe'er, Peter A. Sims

Genome Biol

16

1

2015

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